Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm8885-201ENSMUST00000189382 598 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim43bP86448 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim43bP86448 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim43bP86448 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm18056-201ENSMUST00000207670 568 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm18061-201ENSMUST00000208350 562 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm18063-201ENSMUST00000208529 568 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm18052-201ENSMUST00000208750 559 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Gm18212-201ENSMUST00000211678 889 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.12□□□□□ -0.47
Trim43bP86448 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim43bP86448 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim43bP86448 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim43bP86448 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim43bP86448 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm14999-201ENSMUST00000121039 624 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim43bP86448 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim43bP86448 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.11□□□□□ -0.47
Trim43bP86448 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim43bP86448 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43bP86448 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim43bP86448 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim43bP86448 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim43bP86448 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim43bP86448 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Gm14017-201ENSMUST00000121934 386 ntBASIC12.1□□□□□ -0.47
Trim43bP86448 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim43bP86448 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Gm28882-201ENSMUST00000185504 314 ntBASIC12.1□□□□□ -0.47
Trim43bP86448 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim43bP86448 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim43bP86448 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.1□□□□□ -0.47
Trim43bP86448 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.1□□□□□ -0.47
Trim43bP86448 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim43bP86448 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.1□□□□□ -0.47
Trim43bP86448 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms