Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CiitaP79621 Olfr584-201ENSMUST00000098210 964 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CiitaP79621 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.74□□□□□ -0.37
CiitaP79621 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CiitaP79621 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.73□□□□□ -0.37
CiitaP79621 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.73□□□□□ -0.37
CiitaP79621 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.73□□□□□ -0.37
CiitaP79621 Gm26047-201ENSMUST00000157308 113 ntBASIC12.73□□□□□ -0.37
CiitaP79621 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
CiitaP79621 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CiitaP79621 Gm26047-202ENSMUST00000198840 115 ntBASIC12.73□□□□□ -0.37
CiitaP79621 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.73□□□□□ -0.37
CiitaP79621 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.73□□□□□ -0.37
CiitaP79621 Snora73b-201ENSMUST00000083419 205 ntBASIC12.73□□□□□ -0.37
CiitaP79621 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CiitaP79621 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.73□□□□□ -0.37
CiitaP79621 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CiitaP79621 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.72□□□□□ -0.37
CiitaP79621 Gm12029-201ENSMUST00000120073 832 ntBASIC12.72□□□□□ -0.37
CiitaP79621 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Gm10731-201ENSMUST00000181171 448 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Gm37299-201ENSMUST00000193951 826 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Gm37458-201ENSMUST00000194055 410 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CiitaP79621 Gm9463-201ENSMUST00000206707 601 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.72□□□□□ -0.37
CiitaP79621 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Gm4978-201ENSMUST00000071565 801 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.72□□□□□ -0.37
CiitaP79621 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CiitaP79621 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CiitaP79621 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms