Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.58□□□□□ -0.56
Shox2P70390 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Gm6218-201ENSMUST00000219812 628 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Shox2P70390 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.58□□□□□ -0.56
Shox2P70390 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Shox2P70390 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.58□□□□□ -0.56
Shox2P70390 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Shox2P70390 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.58□□□□□ -0.56
Shox2P70390 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Shox2P70390 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
Shox2P70390 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.57□□□□□ -0.56
Shox2P70390 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.57□□□□□ -0.56
Shox2P70390 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.57□□□□□ -0.56
Shox2P70390 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.57□□□□□ -0.56
Shox2P70390 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Gm18187-201ENSMUST00000196476 984 ntBASIC11.57□□□□□ -0.56
Shox2P70390 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.57□□□□□ -0.56
Shox2P70390 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.57□□□□□ -0.56
Shox2P70390 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Shox2P70390 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Shox2P70390 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Shox2P70390 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms