Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.82□□□□□ -0.84
Pdlim4P70271 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Gm4607-201ENSMUST00000206649 577 ntBASIC9.82□□□□□ -0.84
Pdlim4P70271 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Pdlim4P70271 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Pdlim4P70271 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm12036-201ENSMUST00000120008 530 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.81□□□□□ -0.84
Pdlim4P70271 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm5616-201ENSMUST00000165252 384 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm8741-201ENSMUST00000174736 384 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm29199-201ENSMUST00000187766 775 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm43184-201ENSMUST00000197247 542 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm17931-201ENSMUST00000208132 634 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm18730-201ENSMUST00000218038 343 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.81□□□□□ -0.84
Pdlim4P70271 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Pdlim4P70271 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Pdlim4P70271 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 170 ms