Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm5419-201ENSMUST00000119301 527 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm28975-201ENSMUST00000186412 686 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm18893-201ENSMUST00000198416 943 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gm6013-201ENSMUST00000212264 699 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.45□□□□□ -0.74
Sf3b6P59708 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Sf3b6P59708 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sf3b6P59708 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm12058-201ENSMUST00000118614 437 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm25261-201ENSMUST00000157416 134 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm27023-201ENSMUST00000182372 285 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm6439-201ENSMUST00000199849 862 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm44044-201ENSMUST00000205178 1089 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Sf3b6P59708 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.44□□□□□ -0.74
Sf3b6P59708 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.44□□□□□ -0.74
Sf3b6P59708 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sf3b6P59708 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms