Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Vps33bP59016 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Gm14034-201ENSMUST00000120147 551 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.71□□□□□ -0.05
Vps33bP59016 Gm24078-201ENSMUST00000158184 103 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vps33bP59016 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Gm6612-201ENSMUST00000170777 395 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Gm9204-201ENSMUST00000212641 947 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.71□□□□□ -0.05
Vps33bP59016 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps33bP59016 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps33bP59016 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps33bP59016 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps33bP59016 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps33bP59016 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps33bP59016 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps33bP59016 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps33bP59016 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps33bP59016 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps33bP59016 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm13171-201ENSMUST00000117233 391 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm13827-201ENSMUST00000148801 372 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 AC164087.2-201ENSMUST00000216206 1072 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm6478-201ENSMUST00000099450 742 ntBASIC14.7□□□□□ -0.06
Vps33bP59016 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps33bP59016 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps33bP59016 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC14.69□□□□□ -0.06
Vps33bP59016 Gm16305-201ENSMUST00000140747 556 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Gm26119-201ENSMUST00000175601 104 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Gm20781-201ENSMUST00000193154 693 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Gm21736-201ENSMUST00000195399 693 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Gm45481-201ENSMUST00000209717 877 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps33bP59016 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Vps33bP59016 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Gm10580-201ENSMUST00000097985 396 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Gm10582-201ENSMUST00000097987 396 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Gm10583-201ENSMUST00000097988 396 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.69□□□□□ -0.06
Vps33bP59016 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps33bP59016 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps33bP59016 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms