Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.81□□□□□ -0.52
SmoP56726 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.81□□□□□ -0.52
SmoP56726 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SmoP56726 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Gm12616-201ENSMUST00000118594 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm15881-201ENSMUST00000148792 942 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12624-201ENSMUST00000177615 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12621-201ENSMUST00000177760 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12615-201ENSMUST00000177970 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12622-201ENSMUST00000177975 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12627-201ENSMUST00000178412 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12625-201ENSMUST00000179122 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12614-201ENSMUST00000179586 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm12613-201ENSMUST00000180323 382 ntBASIC11.8□□□□□ -0.52
SmoP56726 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SmoP56726 Gm45770-201ENSMUST00000212105 616 ntBASIC11.8□□□□□ -0.52
SmoP56726 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.8□□□□□ -0.52
SmoP56726 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SmoP56726 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
SmoP56726 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SmoP56726 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SmoP56726 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SmoP56726 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SmoP56726 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.8□□□□□ -0.52
SmoP56726 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.79□□□□□ -0.52
SmoP56726 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SmoP56726 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.79□□□□□ -0.52
SmoP56726 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Gm11836-201ENSMUST00000121022 441 ntBASIC11.79□□□□□ -0.52
SmoP56726 Gm7150-201ENSMUST00000122032 981 ntBASIC11.79□□□□□ -0.52
SmoP56726 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
SmoP56726 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Mir8115-201ENSMUST00000184992 119 ntBASIC11.79□□□□□ -0.52
SmoP56726 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.79□□□□□ -0.52
SmoP56726 Gm43916-201ENSMUST00000205062 967 ntBASIC11.79□□□□□ -0.52
SmoP56726 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.79□□□□□ -0.52
SmoP56726 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.79□□□□□ -0.52
SmoP56726 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SmoP56726 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SmoP56726 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SmoP56726 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.79□□□□□ -0.52
SmoP56726 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SmoP56726 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms