Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.83□□□□□ -0.04
Msh6P54276 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.83□□□□□ -0.04
Msh6P54276 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.83□□□□□ -0.04
Msh6P54276 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Gm14807-201ENSMUST00000116640 983 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.83□□□□□ -0.04
Msh6P54276 Gm42816-201ENSMUST00000198433 325 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Gm43778-201ENSMUST00000199438 199 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Gm18561-201ENSMUST00000206027 804 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Gm18204-201ENSMUST00000209835 793 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Gm45500-201ENSMUST00000211676 803 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Gm19640-201ENSMUST00000214849 464 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Gm18968-201ENSMUST00000221319 862 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Msh6P54276 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Msh6P54276 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.83□□□□□ -0.04
Msh6P54276 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.83□□□□□ -0.04
Msh6P54276 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.83□□□□□ -0.04
Msh6P54276 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Msh6P54276 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Msh6P54276 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Msh6P54276 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Msh6P54276 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.82□□□□□ -0.04
Msh6P54276 Gm12218-201ENSMUST00000117666 399 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Gm15036-201ENSMUST00000118880 400 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Gm11700-201ENSMUST00000119409 403 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.82□□□□□ -0.04
Msh6P54276 Gm24248-201ENSMUST00000157321 322 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.82□□□□□ -0.04
Msh6P54276 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC14.82□□□□□ -0.04
Msh6P54276 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.82□□□□□ -0.04
Msh6P54276 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.82□□□□□ -0.04
Msh6P54276 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.82□□□□□ -0.04
Msh6P54276 Gm30671-201ENSMUST00000214898 318 ntBASIC14.82□□□□□ -0.04
Msh6P54276 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.82□□□□□ -0.04
Msh6P54276 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.82□□□□□ -0.04
Msh6P54276 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Msh6P54276 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.81□□□□□ -0.04
Msh6P54276 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Msh6P54276 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msh6P54276 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Msh6P54276 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Msh6P54276 Gm12948-201ENSMUST00000119406 682 ntBASIC14.81□□□□□ -0.04
Msh6P54276 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.81□□□□□ -0.04
Msh6P54276 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.81□□□□□ -0.04
Msh6P54276 Gm18201-201ENSMUST00000174735 875 ntBASIC14.81□□□□□ -0.04
Msh6P54276 Gm7504-201ENSMUST00000201449 424 ntBASIC14.81□□□□□ -0.04
Msh6P54276 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.81□□□□□ -0.04
Msh6P54276 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.81□□□□□ -0.04
Msh6P54276 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.81□□□□□ -0.04
Msh6P54276 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Msh6P54276 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Msh6P54276 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms