Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Atxn1P54254 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Atxn1P54254 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.72□□□□□ -0.53
Atxn1P54254 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Atxn1P54254 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atxn1P54254 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Atxn1P54254 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Atxn1P54254 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm22920-201ENSMUST00000102175 109 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm26989-201ENSMUST00000182608 749 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.71□□□□□ -0.53
Atxn1P54254 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.71□□□□□ -0.53
Atxn1P54254 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Atxn1P54254 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Gm5805-201ENSMUST00000072779 456 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.71□□□□□ -0.53
Atxn1P54254 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atxn1P54254 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atxn1P54254 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atxn1P54254 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atxn1P54254 Paupar-201ENSMUST00000194826 3482 ntBASIC11.71□□□□□ -0.54
Atxn1P54254 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atxn1P54254 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Atxn1P54254 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atxn1P54254 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.71□□□□□ -0.54
Atxn1P54254 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Atxn1P54254 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Atxn1P54254 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Atxn1P54254 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Atxn1P54254 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm25076-201ENSMUST00000104098 132 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Gm26286-201ENSMUST00000104166 134 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Atxn1P54254 Gm11836-201ENSMUST00000121022 441 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Atxn1P54254 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atxn1P54254 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.7□□□□□ -0.54
Atxn1P54254 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.7□□□□□ -0.54
Atxn1P54254 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms