Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm20482-202ENSMUST00000174729 825 ntBASIC11.76□□□□□ -0.53
Fdft1P53798 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm18893-201ENSMUST00000198416 943 ntBASIC11.76□□□□□ -0.53
Fdft1P53798 Rprl1-202ENSMUST00000198476 238 ntBASIC11.76□□□□□ -0.53
Fdft1P53798 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.76□□□□□ -0.53
Fdft1P53798 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.76□□□□□ -0.53
Fdft1P53798 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Fdft1P53798 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Fdft1P53798 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Fdft1P53798 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Fdft1P53798 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.75□□□□□ -0.53
Fdft1P53798 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.75□□□□□ -0.53
Fdft1P53798 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Fdft1P53798 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.75□□□□□ -0.53
Fdft1P53798 Gm7783-201ENSMUST00000204795 781 ntBASIC11.75□□□□□ -0.53
Fdft1P53798 Gm44651-201ENSMUST00000207343 372 ntBASIC11.75□□□□□ -0.53
Fdft1P53798 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.75□□□□□ -0.53
Fdft1P53798 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Fdft1P53798 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fdft1P53798 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fdft1P53798 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.75□□□□□ -0.53
Fdft1P53798 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.75□□□□□ -0.53
Fdft1P53798 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fdft1P53798 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.74□□□□□ -0.53
Fdft1P53798 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.74□□□□□ -0.53
Fdft1P53798 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Fdft1P53798 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.74□□□□□ -0.53
Fdft1P53798 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Gm32999-201ENSMUST00000192693 562 ntBASIC11.74□□□□□ -0.53
Fdft1P53798 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.74□□□□□ -0.53
Fdft1P53798 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.74□□□□□ -0.53
Fdft1P53798 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Fdft1P53798 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Fdft1P53798 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.74□□□□□ -0.53
Fdft1P53798 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Fdft1P53798 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fdft1P53798 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms