Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lbx1P52955 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Gm4310-201ENSMUST00000177847 889 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Gm43163-201ENSMUST00000196571 442 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.44□□□□□ -0.58
Lbx1P52955 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Gm9487-201ENSMUST00000216600 472 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.44□□□□□ -0.58
Lbx1P52955 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Lbx1P52955 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lbx1P52955 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Lbx1P52955 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.43□□□□□ -0.58
Lbx1P52955 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.43□□□□□ -0.58
Lbx1P52955 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.43□□□□□ -0.58
Lbx1P52955 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Mir453-201ENSMUST00000104732 82 ntBASIC11.43□□□□□ -0.58
Lbx1P52955 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lbx1P52955 Gm11475-201ENSMUST00000118482 476 ntBASIC11.43□□□□□ -0.58
Lbx1P52955 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.43□□□□□ -0.58
Lbx1P52955 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.43□□□□□ -0.58
Lbx1P52955 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Lbx1P52955 Gm7242-201ENSMUST00000221134 705 ntBASIC11.43□□□□□ -0.58
Lbx1P52955 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.43□□□□□ -0.58
Lbx1P52955 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Lbx1P52955 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lbx1P52955 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Gm14497-201ENSMUST00000119537 580 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Gm15703-201ENSMUST00000120250 880 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.42□□□□□ -0.58
Lbx1P52955 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Gm25554-201ENSMUST00000158075 113 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lbx1P52955 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lbx1P52955 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.42□□□□□ -0.58
Lbx1P52955 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.42□□□□□ -0.58
Lbx1P52955 Gm6108-201ENSMUST00000208365 367 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms