Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm21811-201ENSMUST00000096485 930 ntBASIC11.62□□□□□ -0.55
Pdx1P52946 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Pdx1P52946 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.61□□□□□ -0.55
Pdx1P52946 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Pdx1P52946 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm14724-201ENSMUST00000118400 537 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Gm12501-201ENSMUST00000119163 529 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pdx1P52946 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm8100-201ENSMUST00000182906 988 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm45575-201ENSMUST00000210283 548 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Gm5369-201ENSMUST00000217499 588 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Pdx1P52946 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.61□□□□□ -0.55
Pdx1P52946 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pdx1P52946 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdx1P52946 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.61□□□□□ -0.55
Pdx1P52946 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pdx1P52946 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm11450-201ENSMUST00000121144 333 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm5733-201ENSMUST00000190232 939 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Rps4l-202ENSMUST00000204242 789 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Gm7940-201ENSMUST00000218195 769 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 Gm10288-201ENSMUST00000084614 537 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.6□□□□□ -0.55
Pdx1P52946 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdx1P52946 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdx1P52946 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms