Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.18□□□□□ -0.62
RoraP51448 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.18□□□□□ -0.62
RoraP51448 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RoraP51448 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
RoraP51448 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.17□□□□□ -0.62
RoraP51448 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
RoraP51448 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
RoraP51448 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.17□□□□□ -0.62
RoraP51448 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.17□□□□□ -0.62
RoraP51448 Gm8815-201ENSMUST00000173809 620 ntBASIC11.17□□□□□ -0.62
RoraP51448 Gm4310-201ENSMUST00000177847 889 ntBASIC11.17□□□□□ -0.62
RoraP51448 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.17□□□□□ -0.62
RoraP51448 Gm10179-201ENSMUST00000086233 688 ntBASIC11.17□□□□□ -0.62
RoraP51448 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.17□□□□□ -0.62
RoraP51448 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RoraP51448 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.17□□□□□ -0.62
RoraP51448 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.17□□□□□ -0.62
RoraP51448 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RoraP51448 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RoraP51448 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.16□□□□□ -0.62
RoraP51448 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RoraP51448 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RoraP51448 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.16□□□□□ -0.62
RoraP51448 Gm17391-201ENSMUST00000171036 126 ntBASIC11.16□□□□□ -0.62
RoraP51448 Gm19459-201ENSMUST00000176240 835 ntBASIC11.16□□□□□ -0.62
RoraP51448 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.16□□□□□ -0.62
RoraP51448 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.16□□□□□ -0.62
RoraP51448 Gm19287-201ENSMUST00000203190 358 ntBASIC11.16□□□□□ -0.62
RoraP51448 Gm44126-201ENSMUST00000204831 514 ntBASIC11.16□□□□□ -0.62
RoraP51448 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.16□□□□□ -0.62
RoraP51448 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.16□□□□□ -0.62
RoraP51448 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.16□□□□□ -0.62
RoraP51448 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.16□□□□□ -0.62
RoraP51448 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RoraP51448 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RoraP51448 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.16□□□□□ -0.62
RoraP51448 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.16□□□□□ -0.62
RoraP51448 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RoraP51448 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RoraP51448 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms