Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shmt1P50431 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm8459-201ENSMUST00000162504 760 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm18367-201ENSMUST00000176139 600 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Gm44126-201ENSMUST00000204831 514 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Shmt1P50431 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shmt1P50431 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Shmt1P50431 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.42□□□□□ -0.42
Shmt1P50431 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shmt1P50431 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Shmt1P50431 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm15131-201ENSMUST00000119124 595 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Gm15573-201ENSMUST00000119487 540 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Gm11956-201ENSMUST00000119525 512 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm22144-201ENSMUST00000157402 102 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Mir8093-201ENSMUST00000185043 137 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Mir7032-201ENSMUST00000185154 79 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.41□□□□□ -0.42
Shmt1P50431 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.41□□□□□ -0.42
Shmt1P50431 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Shmt1P50431 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Shmt1P50431 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Shmt1P50431 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shmt1P50431 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.4□□□□□ -0.42
Shmt1P50431 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.4□□□□□ -0.42
Shmt1P50431 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.4□□□□□ -0.42
Shmt1P50431 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.4□□□□□ -0.42
Shmt1P50431 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Shmt1P50431 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shmt1P50431 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms