Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.36□□□□□ -0.75
GdnfP48540 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.36□□□□□ -0.75
GdnfP48540 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
GdnfP48540 Gm28877-201ENSMUST00000191349 604 ntBASIC10.36□□□□□ -0.75
GdnfP48540 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.36□□□□□ -0.75
GdnfP48540 Gm43630-201ENSMUST00000201550 776 ntBASIC10.36□□□□□ -0.75
GdnfP48540 Olfr284-202ENSMUST00000206647 966 ntBASIC10.36□□□□□ -0.75
GdnfP48540 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Gm39404-201ENSMUST00000216350 313 ntBASIC10.36□□□□□ -0.75
GdnfP48540 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Gm45930-201ENSMUST00000221330 292 ntBASIC10.36□□□□□ -0.75
GdnfP48540 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
GdnfP48540 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
GdnfP48540 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
GdnfP48540 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
GdnfP48540 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
GdnfP48540 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
GdnfP48540 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
GdnfP48540 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Mir1247-201ENSMUST00000116706 82 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Gm13342-201ENSMUST00000121055 207 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.35□□□□□ -0.75
GdnfP48540 Gm14126-201ENSMUST00000122345 395 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.35□□□□□ -0.75
GdnfP48540 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.35□□□□□ -0.75
GdnfP48540 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Mospd4-201ENSMUST00000180618 576 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Gm27501-201ENSMUST00000183599 107 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Gm27243-201ENSMUST00000183964 521 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
GdnfP48540 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
GdnfP48540 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
GdnfP48540 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
GdnfP48540 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.35□□□□□ -0.75
GdnfP48540 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
GdnfP48540 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.35□□□□□ -0.75
GdnfP48540 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
GdnfP48540 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.34□□□□□ -0.75
GdnfP48540 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
GdnfP48540 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms