Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Prox1P48437 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.3□□□□□ -0.6
Prox1P48437 Gm39404-201ENSMUST00000216350 313 ntBASIC11.3□□□□□ -0.6
Prox1P48437 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.3□□□□□ -0.6
Prox1P48437 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Prox1P48437 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Prox1P48437 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Prox1P48437 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Gm12036-201ENSMUST00000120008 530 ntBASIC11.29□□□□□ -0.6
Prox1P48437 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Prox1P48437 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.29□□□□□ -0.6
Prox1P48437 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.29□□□□□ -0.6
Prox1P48437 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Prox1P48437 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Gm37201-201ENSMUST00000191845 523 ntBASIC11.29□□□□□ -0.6
Prox1P48437 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Prox1P48437 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.29□□□□□ -0.6
Prox1P48437 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.29□□□□□ -0.6
Prox1P48437 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prox1P48437 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.28□□□□□ -0.6
Prox1P48437 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.28□□□□□ -0.6
Prox1P48437 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prox1P48437 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms