Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Gm14274-201ENSMUST00000117182 615 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sox18P43680 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.52□□□□□ -0.57
Sox18P43680 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.52□□□□□ -0.57
Sox18P43680 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox18P43680 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Gm4654-201ENSMUST00000183305 982 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.52□□□□□ -0.57
Sox18P43680 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Gm43752-201ENSMUST00000198475 697 ntBASIC11.52□□□□□ -0.57
Sox18P43680 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.52□□□□□ -0.57
Sox18P43680 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.52□□□□□ -0.57
Sox18P43680 Gm45500-201ENSMUST00000211676 803 ntBASIC11.52□□□□□ -0.57
Sox18P43680 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.52□□□□□ -0.57
Sox18P43680 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox18P43680 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox18P43680 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sox18P43680 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox18P43680 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.52□□□□□ -0.57
Sox18P43680 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox18P43680 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox18P43680 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Sox18P43680 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Gm22920-201ENSMUST00000102175 109 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Gm11511-201ENSMUST00000118146 540 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox18P43680 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Gm13744-201ENSMUST00000118953 850 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Gm12943-201ENSMUST00000119616 210 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.51□□□□□ -0.57
Sox18P43680 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Rprl1-201ENSMUST00000158050 327 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox18P43680 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.51□□□□□ -0.57
Sox18P43680 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Gm29410-201ENSMUST00000188383 694 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.51□□□□□ -0.57
Sox18P43680 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Gm45575-201ENSMUST00000210283 548 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Gm21089-201ENSMUST00000215843 325 ntBASIC11.51□□□□□ -0.57
Sox18P43680 AC126043.1-201ENSMUST00000221304 1141 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Gm4604-201ENSMUST00000025040 390 ntBASIC11.51□□□□□ -0.57
Sox18P43680 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox18P43680 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox18P43680 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sox18P43680 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Sox18P43680 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.51□□□□□ -0.57
Sox18P43680 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Sox18P43680 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox18P43680 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sox18P43680 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms