Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Chd1P40201 AC134860.2-201ENSMUST00000225277 1036 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Krtap6-3-201ENSMUST00000079151 444 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chd1P40201 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd1P40201 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chd1P40201 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chd1P40201 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chd1P40201 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC17.23■□□□□ 0.35
Chd1P40201 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC17.23■□□□□ 0.35
Chd1P40201 Gm44173-201ENSMUST00000204316 132 ntBASIC17.23■□□□□ 0.35
Chd1P40201 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd1P40201 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC17.23■□□□□ 0.35
Chd1P40201 AC159006.3-201ENSMUST00000226918 664 ntBASIC17.23■□□□□ 0.35
Chd1P40201 AC154806.7-201ENSMUST00000227998 202 ntBASIC17.23■□□□□ 0.35
Chd1P40201 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chd1P40201 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chd1P40201 Gm33366-201ENSMUST00000195583 3827 ntBASIC17.23■□□□□ 0.35
Chd1P40201 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chd1P40201 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd1P40201 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Chd1P40201 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Fam220-ps-201ENSMUST00000116535 783 ntBASIC17.22■□□□□ 0.35
Chd1P40201 Gm6939-201ENSMUST00000122029 864 ntBASIC17.22■□□□□ 0.35
Chd1P40201 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 AC165260.2-201ENSMUST00000225371 395 ntBASIC17.22■□□□□ 0.35
Chd1P40201 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Gm44573-201ENSMUST00000191753 2370 ntBASIC17.22■□□□□ 0.35
Chd1P40201 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd1P40201 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Chd1P40201 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd1P40201 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd1P40201 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd1P40201 Mir705-201ENSMUST00000102058 82 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Gm15031-201ENSMUST00000121341 210 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC17.21■□□□□ 0.35
Chd1P40201 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Gm6038-201ENSMUST00000154310 948 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Gm22994-201ENSMUST00000175422 82 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC17.21■□□□□ 0.35
Chd1P40201 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Gm43773-201ENSMUST00000198548 2162 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Gm34248-201ENSMUST00000200027 474 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.21■□□□□ 0.35
Chd1P40201 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Chd1P40201 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd1P40201 Gm25154-201ENSMUST00000157123 119 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Gm8170-201ENSMUST00000218581 945 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms