Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh4P39038 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm11663-201ENSMUST00000117888 290 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Gm14724-201ENSMUST00000118400 537 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh4P39038 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Gm18734-201ENSMUST00000172937 808 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Gm6114-201ENSMUST00000182472 968 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm2965-201ENSMUST00000198365 343 ntBASIC11.28□□□□□ -0.6
Cdh4P39038 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdh4P39038 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cdh4P39038 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh4P39038 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh4P39038 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cdh4P39038 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.27□□□□□ -0.6
Cdh4P39038 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cdh4P39038 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh4P39038 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.27□□□□□ -0.61
Cdh4P39038 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdh4P39038 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdh4P39038 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm15515-201ENSMUST00000117827 822 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 Gm8566-201ENSMUST00000120174 465 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 Gm11450-201ENSMUST00000121144 333 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm14441-201ENSMUST00000121960 540 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm25732-201ENSMUST00000175168 60 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 Gm8100-201ENSMUST00000182906 988 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.27□□□□□ -0.61
Cdh4P39038 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdh4P39038 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh4P39038 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Cdh4P39038 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh4P39038 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdh4P39038 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cdh4P39038 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdh4P39038 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh4P39038 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdh4P39038 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdh4P39038 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cdh4P39038 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms