Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm22379-201ENSMUST00000157480 131 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.86□□□□□ -0.67
Sftpa1P35242 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm7719-201ENSMUST00000182374 975 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm28937-201ENSMUST00000185413 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm29400-201ENSMUST00000187208 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm28662-201ENSMUST00000188446 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm28251-201ENSMUST00000188835 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm19587-201ENSMUST00000191395 545 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm37318-201ENSMUST00000194325 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm38017-201ENSMUST00000194768 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm37287-201ENSMUST00000195449 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm37793-201ENSMUST00000195548 695 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm5870-201ENSMUST00000196461 282 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm43380-201ENSMUST00000200421 220 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.86□□□□□ -0.67
Sftpa1P35242 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.85□□□□□ -0.67
Sftpa1P35242 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sftpa1P35242 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.85□□□□□ -0.67
Sftpa1P35242 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.85□□□□□ -0.67
Sftpa1P35242 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sftpa1P35242 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.85□□□□□ -0.67
Sftpa1P35242 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sftpa1P35242 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Sftpa1P35242 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.85□□□□□ -0.67
Sftpa1P35242 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.85□□□□□ -0.67
Sftpa1P35242 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.85□□□□□ -0.67
Sftpa1P35242 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sftpa1P35242 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms