Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Gm9062-201ENSMUST00000117712 727 ntBASIC10.67□□□□□ -0.7
VtnP29788 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.67□□□□□ -0.7
VtnP29788 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.67□□□□□ -0.7
VtnP29788 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.67□□□□□ -0.7
VtnP29788 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.67□□□□□ -0.7
VtnP29788 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.67□□□□□ -0.7
VtnP29788 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.67□□□□□ -0.7
VtnP29788 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.67□□□□□ -0.7
VtnP29788 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.67□□□□□ -0.7
VtnP29788 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VtnP29788 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
VtnP29788 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VtnP29788 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.66□□□□□ -0.7
VtnP29788 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.66□□□□□ -0.7
VtnP29788 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.66□□□□□ -0.7
VtnP29788 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.66□□□□□ -0.7
VtnP29788 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.66□□□□□ -0.7
VtnP29788 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.66□□□□□ -0.7
VtnP29788 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Gm27530-201ENSMUST00000184096 98 ntBASIC10.66□□□□□ -0.7
VtnP29788 Gm19353-201ENSMUST00000184561 445 ntBASIC10.66□□□□□ -0.7
VtnP29788 Gm3332-201ENSMUST00000189337 928 ntBASIC10.66□□□□□ -0.7
VtnP29788 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.66□□□□□ -0.7
VtnP29788 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.66□□□□□ -0.7
VtnP29788 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Gm45770-201ENSMUST00000212105 616 ntBASIC10.66□□□□□ -0.7
VtnP29788 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Gm2553-201ENSMUST00000215986 605 ntBASIC10.66□□□□□ -0.7
VtnP29788 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.66□□□□□ -0.7
VtnP29788 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
VtnP29788 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VtnP29788 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms