Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.46□□□□□ -0.25
Vcam1P29533 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.46□□□□□ -0.25
Vcam1P29533 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Gm39288-201ENSMUST00000210554 446 ntBASIC13.46□□□□□ -0.25
Vcam1P29533 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.46□□□□□ -0.25
Vcam1P29533 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.46□□□□□ -0.25
Vcam1P29533 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vcam1P29533 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vcam1P29533 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.46□□□□□ -0.25
Vcam1P29533 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.46□□□□□ -0.26
Vcam1P29533 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vcam1P29533 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vcam1P29533 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vcam1P29533 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vcam1P29533 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vcam1P29533 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vcam1P29533 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Vcam1P29533 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vcam1P29533 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vcam1P29533 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Gm25148-201ENSMUST00000104611 123 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Gm15528-201ENSMUST00000117821 864 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Gm13117-201ENSMUST00000120894 691 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.45□□□□□ -0.26
Vcam1P29533 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Gm23694-201ENSMUST00000179335 110 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Vcam1P29533 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Vcam1P29533 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.45□□□□□ -0.26
Vcam1P29533 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Vcam1P29533 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.45□□□□□ -0.26
Vcam1P29533 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vcam1P29533 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vcam1P29533 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vcam1P29533 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vcam1P29533 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vcam1P29533 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.44□□□□□ -0.26
Vcam1P29533 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.44□□□□□ -0.26
Vcam1P29533 Gm13422-201ENSMUST00000118834 504 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.44□□□□□ -0.26
Vcam1P29533 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Gm42816-201ENSMUST00000198433 325 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.44□□□□□ -0.26
Vcam1P29533 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.44□□□□□ -0.26
Vcam1P29533 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vcam1P29533 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.44□□□□□ -0.26
Vcam1P29533 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms