Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm15352-201ENSMUST00000118696 270 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm14460-201ENSMUST00000121511 639 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.11□□□□□ -0.47
Nfkb1P25799 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.11□□□□□ -0.47
Nfkb1P25799 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Nfkb1P25799 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.11□□□□□ -0.47
Nfkb1P25799 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nfkb1P25799 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm22920-201ENSMUST00000102175 109 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm14193-201ENSMUST00000105067 153 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm12036-201ENSMUST00000120008 530 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm14665-201ENSMUST00000122294 557 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.1□□□□□ -0.47
Nfkb1P25799 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.1□□□□□ -0.47
Nfkb1P25799 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm9192-201ENSMUST00000183221 985 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Mir8115-201ENSMUST00000184992 119 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm6450-201ENSMUST00000200896 574 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm42599-201ENSMUST00000201308 469 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm45113-201ENSMUST00000207518 165 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.1□□□□□ -0.47
Nfkb1P25799 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nfkb1P25799 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nfkb1P25799 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nfkb1P25799 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nfkb1P25799 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.09□□□□□ -0.47
Nfkb1P25799 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms