Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm2965-201ENSMUST00000198365 343 ntBASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.91□□□□□ -0.66
Tnfrsf1bP25119 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm25509-201ENSMUST00000116985 106 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm13035-201ENSMUST00000117496 342 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm14542-201ENSMUST00000118460 1248 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm6450-201ENSMUST00000200896 574 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm45575-201ENSMUST00000210283 548 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Gm7848-201ENSMUST00000210739 718 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfrsf1bP25119 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1bP25119 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1bP25119 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfrsf1bP25119 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Tnfrsf1bP25119 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Gm24891-201ENSMUST00000104391 136 ntBASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfrsf1bP25119 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms