Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Cts7-204ENSMUST00000225321 1257 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Clk1P22518 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.07□□□□□ -0.64
Clk1P22518 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Clk1P22518 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.07□□□□□ -0.64
Clk1P22518 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Mir8109-201ENSMUST00000184375 117 ntBASIC11.07□□□□□ -0.64
Clk1P22518 Gm43179-201ENSMUST00000198797 275 ntBASIC11.07□□□□□ -0.64
Clk1P22518 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.07□□□□□ -0.64
Clk1P22518 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Gm13097-201ENSMUST00000210722 397 ntBASIC11.07□□□□□ -0.64
Clk1P22518 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Clk1P22518 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Clk1P22518 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Clk1P22518 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.07□□□□□ -0.64
Clk1P22518 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clk1P22518 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Gm23270-201ENSMUST00000104055 131 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Rprl1-201ENSMUST00000158050 327 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clk1P22518 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Clk1P22518 Gm20482-202ENSMUST00000174729 825 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Gm5706-201ENSMUST00000181525 993 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Gm27046-201ENSMUST00000182160 463 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Gm38241-201ENSMUST00000192641 898 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Gm43822-201ENSMUST00000200285 476 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Gm35960-201ENSMUST00000202712 767 ntBASIC11.06□□□□□ -0.64
Clk1P22518 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.06□□□□□ -0.64
Clk1P22518 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clk1P22518 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Clk1P22518 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Clk1P22518 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Clk1P22518 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms