Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.35□□□□□ -0.75
Ccl3P10855 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm13351-201ENSMUST00000118087 414 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm15549-201ENSMUST00000121595 622 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccl3P10855 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm22379-201ENSMUST00000157480 131 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccl3P10855 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccl3P10855 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm5621-201ENSMUST00000187303 640 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.35□□□□□ -0.75
Ccl3P10855 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccl3P10855 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ccl3P10855 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.35□□□□□ -0.75
Ccl3P10855 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccl3P10855 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ccl3P10855 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ccl3P10855 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccl3P10855 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm15329-201ENSMUST00000121408 155 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Gm12783-201ENSMUST00000121425 397 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm25492-201ENSMUST00000157383 129 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm8723-201ENSMUST00000166076 820 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Gm8701-201ENSMUST00000169259 874 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccl3P10855 Gm18463-201ENSMUST00000207258 474 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 Gm39288-201ENSMUST00000210554 446 ntBASIC10.34□□□□□ -0.75
Ccl3P10855 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms