Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NclP09405 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NclP09405 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NclP09405 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NclP09405 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NclP09405 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NclP09405 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC17.44■□□□□ 0.38
NclP09405 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NclP09405 CT009489.1-201ENSMUST00000227740 1893 ntBASIC17.44■□□□□ 0.38
NclP09405 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NclP09405 Gm45199-201ENSMUST00000207640 1507 ntBASIC17.44■□□□□ 0.38
NclP09405 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC17.44■□□□□ 0.38
NclP09405 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC17.44■□□□□ 0.38
NclP09405 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC17.44■□□□□ 0.38
NclP09405 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC17.44■□□□□ 0.38
NclP09405 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC17.44■□□□□ 0.38
NclP09405 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC17.44■□□□□ 0.38
NclP09405 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.44■□□□□ 0.38
NclP09405 Gm37299-201ENSMUST00000193951 826 ntBASIC17.44■□□□□ 0.38
NclP09405 Gm9645-201ENSMUST00000197131 792 ntBASIC17.44■□□□□ 0.38
NclP09405 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC17.44■□□□□ 0.38
NclP09405 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Gm43075-201ENSMUST00000198613 3905 ntBASIC17.44■□□□□ 0.38
NclP09405 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NclP09405 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NclP09405 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Gm15782-201ENSMUST00000121073 445 ntBASIC17.43■□□□□ 0.38
NclP09405 Gm7150-201ENSMUST00000122032 981 ntBASIC17.43■□□□□ 0.38
NclP09405 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Gm18367-201ENSMUST00000176139 600 ntBASIC17.43■□□□□ 0.38
NclP09405 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Gm9136-201ENSMUST00000193368 454 ntBASIC17.43■□□□□ 0.38
NclP09405 Gm5542-201ENSMUST00000195485 1089 ntBASIC17.43■□□□□ 0.38
NclP09405 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Gm6430-201ENSMUST00000054664 1248 ntBASIC17.43■□□□□ 0.38
NclP09405 Gm5879-201ENSMUST00000089501 1209 ntBASIC17.43■□□□□ 0.38
NclP09405 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NclP09405 Zfp125-201ENSMUST00000079237 2488 ntBASIC17.43■□□□□ 0.38
NclP09405 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NclP09405 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NclP09405 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NclP09405 CT025624.1-201ENSMUST00000224007 2700 ntBASIC17.42■□□□□ 0.38
NclP09405 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NclP09405 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NclP09405 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC17.42■□□□□ 0.38
NclP09405 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC17.42■□□□□ 0.38
NclP09405 Gm6485-201ENSMUST00000160676 439 ntBASIC17.42■□□□□ 0.38
NclP09405 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Gm44980-201ENSMUST00000205826 314 ntBASIC17.42■□□□□ 0.38
NclP09405 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC17.42■□□□□ 0.38
NclP09405 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.42■□□□□ 0.38
NclP09405 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NclP09405 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.42■□□□□ 0.38
NclP09405 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NclP09405 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms