Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Mir6979-201ENSMUST00000183927 56 ntBASIC11.58□□□□□ -0.56
Hoxa4P06798 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Nsd1-205ENSMUST00000224693 852 ntBASIC11.58□□□□□ -0.56
Hoxa4P06798 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.58□□□□□ -0.56
Hoxa4P06798 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Hoxa4P06798 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.58□□□□□ -0.56
Hoxa4P06798 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.57□□□□□ -0.56
Hoxa4P06798 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm11331-201ENSMUST00000119764 288 ntBASIC11.57□□□□□ -0.56
Hoxa4P06798 Mir3547-201ENSMUST00000175461 88 ntBASIC11.57□□□□□ -0.56
Hoxa4P06798 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.57□□□□□ -0.56
Hoxa4P06798 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.57□□□□□ -0.56
Hoxa4P06798 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hoxa4P06798 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Mir7686-201ENSMUST00000200604 57 ntBASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm9555-201ENSMUST00000200908 583 ntBASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.56□□□□□ -0.56
Hoxa4P06798 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms