Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P06344 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P06344 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P06344 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.49□□□□□ -0.73
P06344 Gm12165-201ENSMUST00000117047 342 ntBASIC10.49□□□□□ -0.73
P06344 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.49□□□□□ -0.73
P06344 Gm8815-201ENSMUST00000173809 620 ntBASIC10.49□□□□□ -0.73
P06344 Gm38117-201ENSMUST00000194653 939 ntBASIC10.49□□□□□ -0.73
P06344 Gm42997-202ENSMUST00000200321 985 ntBASIC10.49□□□□□ -0.73
P06344 Gm6905-201ENSMUST00000205729 511 ntBASIC10.49□□□□□ -0.73
P06344 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Ntng1-201ENSMUST00000051253 327 ntBASIC10.49□□□□□ -0.73
P06344 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.49□□□□□ -0.73
P06344 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.49□□□□□ -0.73
P06344 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
P06344 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P06344 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.48□□□□□ -0.73
P06344 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.48□□□□□ -0.73
P06344 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P06344 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Gm15207-201ENSMUST00000119259 442 ntBASIC10.48□□□□□ -0.73
P06344 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.48□□□□□ -0.73
P06344 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.48□□□□□ -0.73
P06344 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P06344 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
P06344 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P06344 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.48□□□□□ -0.73
P06344 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.48□□□□□ -0.73
P06344 Gm8959-201ENSMUST00000213150 571 ntBASIC10.48□□□□□ -0.73
P06344 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.48□□□□□ -0.73
P06344 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.48□□□□□ -0.73
P06344 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.48□□□□□ -0.73
P06344 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.48□□□□□ -0.73
P06344 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P06344 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
P06344 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P06344 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P06344 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P06344 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.47□□□□□ -0.73
P06344 Gm13809-201ENSMUST00000117921 597 ntBASIC10.47□□□□□ -0.73
P06344 Gm13611-201ENSMUST00000118269 318 ntBASIC10.47□□□□□ -0.73
P06344 Gm13263-201ENSMUST00000121271 838 ntBASIC10.47□□□□□ -0.73
P06344 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.47□□□□□ -0.73
P06344 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.47□□□□□ -0.73
P06344 Gm10051-201ENSMUST00000145209 414 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms