Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.16□□□□□ -0.46
PrnpP04925 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrnpP04925 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
PrnpP04925 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.16□□□□□ -0.46
PrnpP04925 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
PrnpP04925 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
PrnpP04925 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PrnpP04925 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gm4294-201ENSMUST00000105169 614 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.15□□□□□ -0.46
PrnpP04925 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
PrnpP04925 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gm13422-201ENSMUST00000118834 504 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Gm15549-201ENSMUST00000121595 622 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.15□□□□□ -0.46
PrnpP04925 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.15□□□□□ -0.46
PrnpP04925 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.15□□□□□ -0.46
PrnpP04925 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
PrnpP04925 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
PrnpP04925 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.15□□□□□ -0.46
PrnpP04925 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.15□□□□□ -0.46
PrnpP04925 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
PrnpP04925 Gm17889-201ENSMUST00000198410 598 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Gm17825-201ENSMUST00000206836 794 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.15□□□□□ -0.46
PrnpP04925 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PrnpP04925 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Mir483-201ENSMUST00000093631 73 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.15□□□□□ -0.46
PrnpP04925 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
PrnpP04925 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.15□□□□□ -0.46
PrnpP04925 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
PrnpP04925 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PrnpP04925 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
PrnpP04925 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Gm13022-201ENSMUST00000121181 285 ntBASIC12.14□□□□□ -0.47
PrnpP04925 Gm11980-201ENSMUST00000121445 986 ntBASIC12.14□□□□□ -0.47
PrnpP04925 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.14□□□□□ -0.47
PrnpP04925 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.14□□□□□ -0.47
PrnpP04925 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Gm43163-201ENSMUST00000196571 442 ntBASIC12.14□□□□□ -0.47
PrnpP04925 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
PrnpP04925 Gm9111-201ENSMUST00000219394 709 ntBASIC12.14□□□□□ -0.47
PrnpP04925 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.14□□□□□ -0.47
PrnpP04925 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PrnpP04925 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
PrnpP04925 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
PrnpP04925 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.14□□□□□ -0.47
PrnpP04925 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.14□□□□□ -0.47
PrnpP04925 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PrnpP04925 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PrnpP04925 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PrnpP04925 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PrnpP04925 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms