Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Gm10012-201ENSMUST00000078252 192 ntBASIC10.32□□□□□ -0.76
P04224 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
P04224 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
P04224 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P04224 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.32□□□□□ -0.76
P04224 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04224 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
P04224 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.31□□□□□ -0.76
P04224 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.31□□□□□ -0.76
P04224 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04224 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04224 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.31□□□□□ -0.76
P04224 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.31□□□□□ -0.76
P04224 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.31□□□□□ -0.76
P04224 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.31□□□□□ -0.76
P04224 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04224 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.31□□□□□ -0.76
P04224 Gm24644-201ENSMUST00000157114 139 ntBASIC10.31□□□□□ -0.76
P04224 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.31□□□□□ -0.76
P04224 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04224 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.31□□□□□ -0.76
P04224 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.31□□□□□ -0.76
P04224 Gm6007-201ENSMUST00000208170 823 ntBASIC10.31□□□□□ -0.76
P04224 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
P04224 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.31□□□□□ -0.76
P04224 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.31□□□□□ -0.76
P04224 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04224 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.31□□□□□ -0.76
P04224 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
P04224 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04224 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
P04224 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
P04224 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.3□□□□□ -0.76
P04224 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.3□□□□□ -0.76
P04224 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.3□□□□□ -0.76
P04224 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
P04224 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.3□□□□□ -0.76
P04224 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.3□□□□□ -0.76
P04224 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.3□□□□□ -0.76
P04224 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.3□□□□□ -0.76
P04224 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.3□□□□□ -0.76
P04224 Gm27243-201ENSMUST00000183964 521 ntBASIC10.3□□□□□ -0.76
P04224 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.3□□□□□ -0.76
P04224 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.3□□□□□ -0.76
P04224 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.3□□□□□ -0.76
P04224 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04224 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
P04224 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms