Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm28251-201ENSMUST00000188835 695 ntBASIC11.24□□□□□ -0.61
P04213 Gm37318-201ENSMUST00000194325 695 ntBASIC11.24□□□□□ -0.61
P04213 Gm38017-201ENSMUST00000194768 695 ntBASIC11.24□□□□□ -0.61
P04213 Gm37287-201ENSMUST00000195449 695 ntBASIC11.24□□□□□ -0.61
P04213 Gm37793-201ENSMUST00000195548 695 ntBASIC11.24□□□□□ -0.61
P04213 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.24□□□□□ -0.61
P04213 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.24□□□□□ -0.61
P04213 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.24□□□□□ -0.61
P04213 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
P04213 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
P04213 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.24□□□□□ -0.61
P04213 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
P04213 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.24□□□□□ -0.61
P04213 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
P04213 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04213 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04213 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.23□□□□□ -0.61
P04213 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.23□□□□□ -0.61
P04213 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
P04213 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
P04213 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.23□□□□□ -0.61
P04213 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
P04213 Gm26361-201ENSMUST00000158868 186 ntBASIC11.23□□□□□ -0.61
P04213 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.23□□□□□ -0.61
P04213 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
P04213 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
P04213 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.23□□□□□ -0.61
P04213 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Gm27320-201ENSMUST00000184892 109 ntBASIC11.23□□□□□ -0.61
P04213 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.23□□□□□ -0.61
P04213 Gm38117-201ENSMUST00000194653 939 ntBASIC11.23□□□□□ -0.61
P04213 Gm6450-201ENSMUST00000200896 574 ntBASIC11.23□□□□□ -0.61
P04213 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.23□□□□□ -0.61
P04213 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
P04213 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04213 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
P04213 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
P04213 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
P04213 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.23□□□□□ -0.61
P04213 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.23□□□□□ -0.61
P04213 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04213 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P04213 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04213 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms