Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm7851-201ENSMUST00000117574 323 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.65□□□□□ -0.54
Pdlim1O70400 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm18165-201ENSMUST00000217426 928 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 Gm6867-201ENSMUST00000219165 425 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.65□□□□□ -0.54
Pdlim1O70400 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Pdlim1O70400 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pdlim1O70400 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pdlim1O70400 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.55
Pdlim1O70400 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pdlim1O70400 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Pdlim1O70400 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Pdlim1O70400 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm14058-201ENSMUST00000116082 735 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm11783-201ENSMUST00000119549 885 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm16570-201ENSMUST00000161951 436 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm37466-201ENSMUST00000195692 652 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm6905-201ENSMUST00000205729 511 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm6108-201ENSMUST00000208365 367 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.64□□□□□ -0.55
Pdlim1O70400 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdlim1O70400 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdlim1O70400 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 1861.1 ms