Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smarce1O54941 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.93□□□□□ -0.18
Smarce1O54941 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Gm23270-201ENSMUST00000104055 131 ntBASIC13.93□□□□□ -0.18
Smarce1O54941 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Gm27046-201ENSMUST00000182160 463 ntBASIC13.93□□□□□ -0.18
Smarce1O54941 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.93□□□□□ -0.18
Smarce1O54941 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Smarce1O54941 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Smarce1O54941 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.93□□□□□ -0.18
Smarce1O54941 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Smarce1O54941 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarce1O54941 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Gm12241-201ENSMUST00000118330 726 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 Gm14109-201ENSMUST00000118814 309 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 Gm15004-201ENSMUST00000119192 630 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 Gm8062-201ENSMUST00000139696 444 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarce1O54941 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Gm27572-201ENSMUST00000183702 255 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.92□□□□□ -0.18
Smarce1O54941 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarce1O54941 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarce1O54941 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.91□□□□□ -0.18
Smarce1O54941 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.91□□□□□ -0.18
Smarce1O54941 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms