Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Npc1O35604 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.5□□□□□ -0.57
Npc1O35604 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Npc1O35604 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Npc1O35604 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.5□□□□□ -0.57
Npc1O35604 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npc1O35604 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Npc1O35604 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.49□□□□□ -0.57
Npc1O35604 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.49□□□□□ -0.57
Npc1O35604 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Gm15515-201ENSMUST00000117827 822 ntBASIC11.49□□□□□ -0.57
Npc1O35604 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
Npc1O35604 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.49□□□□□ -0.57
Npc1O35604 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.49□□□□□ -0.57
Npc1O35604 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.49□□□□□ -0.57
Npc1O35604 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Npc1O35604 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Npc1O35604 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Npc1O35604 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Npc1O35604 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
Npc1O35604 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Gm11509-201ENSMUST00000117358 325 ntBASIC11.48□□□□□ -0.57
Npc1O35604 Gm7851-201ENSMUST00000117574 323 ntBASIC11.48□□□□□ -0.57
Npc1O35604 B9d1os-201ENSMUST00000137010 674 ntBASIC11.48□□□□□ -0.57
Npc1O35604 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.48□□□□□ -0.57
Npc1O35604 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Npc1O35604 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.48□□□□□ -0.57
Npc1O35604 Gm17931-201ENSMUST00000208132 634 ntBASIC11.48□□□□□ -0.57
Npc1O35604 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Npc1O35604 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.48□□□□□ -0.57
Npc1O35604 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Npc1O35604 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Npc1O35604 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms