Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm18165-201ENSMUST00000217426 928 ntBASIC10.49□□□□□ -0.73
Alx4O35137 Gm18065-201ENSMUST00000221395 526 ntBASIC10.49□□□□□ -0.73
Alx4O35137 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.49□□□□□ -0.73
Alx4O35137 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Alx4O35137 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.49□□□□□ -0.73
Alx4O35137 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Alx4O35137 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.49□□□□□ -0.73
Alx4O35137 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.49□□□□□ -0.73
Alx4O35137 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.49□□□□□ -0.73
Alx4O35137 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Alx4O35137 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Alx4O35137 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Alx4O35137 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.48□□□□□ -0.73
Alx4O35137 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Gm12015-201ENSMUST00000117065 843 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.48□□□□□ -0.73
Alx4O35137 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.48□□□□□ -0.73
Alx4O35137 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Mospd4-201ENSMUST00000180618 576 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Alx4O35137 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Alx4O35137 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.48□□□□□ -0.73
Alx4O35137 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Alx4O35137 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Alx4O35137 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Alx4O35137 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.48□□□□□ -0.73
Alx4O35137 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Alx4O35137 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Alx4O35137 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.47□□□□□ -0.73
Alx4O35137 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms