Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf11bO08712 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf11bO08712 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf11bO08712 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfrsf11bO08712 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf11bO08712 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfrsf11bO08712 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm22133-201ENSMUST00000102082 109 ntBASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm24255-201ENSMUST00000104481 128 ntBASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm38341-201ENSMUST00000195357 515 ntBASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Gm45224-201ENSMUST00000208203 414 ntBASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfrsf11bO08712 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf11bO08712 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Tnfrsf11bO08712 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Tnfrsf11bO08712 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.9□□□□□ -0.51
Tnfrsf11bO08712 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Tnfrsf11bO08712 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm14381-201ENSMUST00000122105 414 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm15276-201ENSMUST00000145953 498 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm13097-201ENSMUST00000210722 397 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Tnfrsf11bO08712 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms