Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Mir1190-201ENSMUST00000116925 96 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm24140-201ENSMUST00000122773 326 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Mir1941-201ENSMUST00000157834 83 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm5040-201ENSMUST00000218609 800 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm9102-201ENSMUST00000219250 465 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc188F6WEU2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Gm4294-201ENSMUST00000105169 614 ntBASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Gm16219-201ENSMUST00000120096 274 ntBASIC11.81□□□□□ -0.52
Ccdc188F6WEU2 Gm13505-201ENSMUST00000121666 817 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms