Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm9507-202ENSMUST00000180157 654 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm24791-201ENSMUST00000104284 131 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm23912-201ENSMUST00000104687 87 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm11578-201ENSMUST00000118530 459 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm15004-201ENSMUST00000119192 630 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Gm7504-201ENSMUST00000201449 424 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.55□□□□□ -0.72
Shank1D3YZU1 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Shank1D3YZU1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm15615-201ENSMUST00000118876 198 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm10169-201ENSMUST00000121822 348 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm6108-201ENSMUST00000208365 367 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm39288-201ENSMUST00000210554 446 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.54□□□□□ -0.72
Shank1D3YZU1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Shank1D3YZU1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms