Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Mir7677-201ENSMUST00000184226 67 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm37666-201ENSMUST00000194110 866 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm18038-201ENSMUST00000197900 485 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm6450-201ENSMUST00000200896 574 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm26448-201ENSMUST00000082446 203 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
H2afb2S4R1M3 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm11509-201ENSMUST00000117358 325 ntBASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.75□□□□□ -0.53
H2afb2S4R1M3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm24749-201ENSMUST00000157838 343 ntBASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Rps4l-202ENSMUST00000204242 789 ntBASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm270-201ENSMUST00000223010 976 ntBASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
H2afb2S4R1M3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
H2afb2S4R1M3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms