Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.87□□□□□ -0.51
Mrpl40Q9Z2Q5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.87□□□□□ -0.51
Mrpl40Q9Z2Q5 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Mrpl40Q9Z2Q5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Mrpl40Q9Z2Q5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm24934-201ENSMUST00000103764 111 ntBASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Mrpl40Q9Z2Q5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm23949-201ENSMUST00000104027 127 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm23699-201ENSMUST00000158835 135 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm44958-201ENSMUST00000203734 736 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms