Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm9089-201ENSMUST00000122027 526 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm45219-201ENSMUST00000205602 465 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm15744-201ENSMUST00000161734 213 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm24514-201ENSMUST00000174961 285 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Scn8aQ9WTU3 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Scn8aQ9WTU3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Scn8aQ9WTU3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gm13937-201ENSMUST00000121000 988 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Olfml3-204ENSMUST00000169286 874 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gm8420-201ENSMUST00000097103 598 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Scn8aQ9WTU3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms