Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm14719-201ENSMUST00000121891 340 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm24694-201ENSMUST00000180054 110 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm27663-201ENSMUST00000184839 110 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm10576-201ENSMUST00000191927 825 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trem1Q9JKE2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm15371-201ENSMUST00000117057 784 ntBASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm28693-202ENSMUST00000190758 331 ntBASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm6983-201ENSMUST00000214912 628 ntBASIC10.5□□□□□ -0.73
Trem1Q9JKE2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms