Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ube3bQ9ES34 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Gm11949-201ENSMUST00000117640 372 ntBASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ube3bQ9ES34 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Zfp125-201ENSMUST00000079237 2488 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Gm21092-201ENSMUST00000178995 955 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14□□□□□ -0.17
Ube3bQ9ES34 AC129219.2-201ENSMUST00000224324 701 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 AC118639.2-201ENSMUST00000226289 223 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Olfr584-201ENSMUST00000098210 964 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Gm38194-201ENSMUST00000194529 2211 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ube3bQ9ES34 Gm38089-201ENSMUST00000193585 1514 ntBASIC14□□□□□ -0.17
Ube3bQ9ES34 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14□□□□□ -0.17
Ube3bQ9ES34 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Matn2-203ENSMUST00000226766 3252 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms