Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gm8810-201ENSMUST00000172895 754 ntBASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gm37497-201ENSMUST00000195830 798 ntBASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ube4bQ9ES00 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Gm12490-201ENSMUST00000120255 560 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Gm12138-201ENSMUST00000122180 951 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Gm27486-201ENSMUST00000184923 80 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.28□□□□□ -0.6
Ube4bQ9ES00 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ube4bQ9ES00 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ube4bQ9ES00 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms