Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm12363-201ENSMUST00000122250 668 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Mir1894-201ENSMUST00000122802 81 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm6244-201ENSMUST00000178732 841 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm10076-201ENSMUST00000073238 384 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm5356-201ENSMUST00000093326 615 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmgn3Q9DCB1 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Hmgn3Q9DCB1 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm12203-201ENSMUST00000118235 598 ntBASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm12209-201ENSMUST00000120089 596 ntBASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms