Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cdc40Q9DC48 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cdc40Q9DC48 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdc40Q9DC48 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdc40Q9DC48 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdc40Q9DC48 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm9062-201ENSMUST00000117712 727 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm18734-201ENSMUST00000172937 808 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm5706-201ENSMUST00000181525 993 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdc40Q9DC48 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm22133-201ENSMUST00000102082 109 ntBASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Gm45118-201ENSMUST00000208928 825 ntBASIC10.96□□□□□ -0.65
Cdc40Q9DC48 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cdc40Q9DC48 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms