Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp5Q9D7S9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp5Q9D7S9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gm14644-201ENSMUST00000116671 647 ntBASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.66□□□□□ -0.06
Chmp5Q9D7S9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Gm37580-201ENSMUST00000192408 2800 ntBASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Gm11989-201ENSMUST00000117240 672 ntBASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Gm11362-201ENSMUST00000118838 850 ntBASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chmp5Q9D7S9 Gm5370-201ENSMUST00000187187 574 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms