Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm5419-201ENSMUST00000119301 527 ntBASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm31256-201ENSMUST00000194705 506 ntBASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm45224-201ENSMUST00000208203 414 ntBASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp4cQ9D7F7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Gm18893-201ENSMUST00000198416 943 ntBASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Gm5186-201ENSMUST00000218781 920 ntBASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp4cQ9D7F7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp4cQ9D7F7 Gm3096-201ENSMUST00000185770 364 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms