Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm37905-201ENSMUST00000195310 341 ntBASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.04□□□□□ -0.16
Stag1Q9D3E6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Olfr584-201ENSMUST00000098210 964 ntBASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stag1Q9D3E6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm11628-201ENSMUST00000117568 171 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm26047-201ENSMUST00000157308 113 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm10807-201ENSMUST00000177134 795 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Mir6998-201ENSMUST00000183343 64 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm28324-201ENSMUST00000187913 264 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm37981-201ENSMUST00000194280 535 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm26047-202ENSMUST00000198840 115 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm42657-201ENSMUST00000201746 211 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm8574-201ENSMUST00000203207 924 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Stag1Q9D3E6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Stag1Q9D3E6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Mir1956-201ENSMUST00000157748 65 ntBASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Gm25072-201ENSMUST00000175233 235 ntBASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Gm8342-201ENSMUST00000209839 757 ntBASIC14.02□□□□□ -0.17
Stag1Q9D3E6 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Stag1Q9D3E6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms